LOCUS CO961178 369 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18e03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21581 Q21581 COSMID M60. [1] ;contains element MER9 repetitive element, mRNA sequence. ACCESSION CO961178 VERSION CO961178.1 GI:51334362 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 369) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 358. FEATURES Location/Qualifiers source 1..369 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcatcacttg ctccctgctt tgtgccaact ggtatggcgg caaatcctgc ttctatgacg 61 gccgtgtcgg ctacgcaagt ggactcaact tcgtcatcgt catcatcaac attgtcctct 121 ttttcctgaa cttcctgaat gttgcggtgt accgcatgga acgcctctat tcggtggtgg 181 gcgtcatcct gttcatcatc gcgttcggag tgatgatctg gtacttgatt gagtatgaag 241 tgaaccgtgg gcagttcatt gctgcgacgg tcttcatcgg gatacagatg gtcctgttca 301 tctgggatta ccaaattctg cacggacagg catacgactg aggagacgag gatggacccc 361 aaactggga //