LOCUS CO961175 635 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18d11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961175 VERSION CO961175.1 GI:51334359 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 635) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 641 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..635 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tacttcagat tgtttgtgca gcatattatt tcgaaatttg ccactttcga gctttgcatc 61 agccaacaga ttggctagta attaccaagc ggcagtggca gtgaccgcaa caccaaattt 121 gacgaagagt agggaagcaa aaaagaaaga gaaggatttc gaaaaactgc agaaatttta 181 tcaagaaaga cccccaaaga acagaaagaa gatcgtggtc gctgatactg agatagacac 241 tcacgagcct ggcaaagatg gccagggttg gatgaattgt gtctacgaga aattgcatgc 301 agaataccaa gaacatgaga ctaggcagcg ccaagagagg cgaaaattgc gagcggagct 361 gaaagatttt tgcataggaa gaacactgag gttaccacca gagcaggttc cattagaaga 421 gatgttacca gaggaaaacg gtgatgccat aaaccttgtt tatatggctc gcagcaacca 481 tgcgcgaaga accaacaaag gaaacttgat gaatgttgat ccggcgatcg atcgatagct 541 gccaattcat tgttcatttt tagatcttgc tgttggtttg tgaatgtcgt ttatagaaaa 601 tagttcaatg ctcaaaaaaa aaaaaaaaaa caaaa //