LOCUS CO961173 704 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18d09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:S61B_HUMAN P38391 PROTEIN TRANSPORT PROTEIN SEC61 BETA SUBUNIT. ;contains element MSR1 repetitive element, mRNA sequence. ACCESSION CO961173 VERSION CO961173.1 GI:51334357 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 704) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..704 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atttattacg aattaccagt gaaattttac gtatagctac tatggctgac tcagcaaaag 61 tacctggcgg cgggaaggta gttcctcgca cggctgctgg tggagcactc agacaacggc 121 gtggtgccgg tacgaccaac aacagaactc gcactaccgg cggcggtgga ggcggtggcg 181 gaatgaacag tggaggacta tggcgcttct acacggaaga ctcgactgga ctgaagattg 241 gaccggtccc tgtgctcgtc atgtcacttg tgttcatcgc cagcgttttc attcttcaca 301 tctggggaaa atacagtcgc ggtcactgaa gctagaacac cacaagaaat ggacaaatcc 361 ccccacccga ctgtaaccac aatttgttta ttttcttaaa caagtgatcc aagtgatatc 421 ctggcaatct aaagctcttc ctgacataaa ggttatttat tctgcaaaaa aaaaaaaaaa 481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa cccccaaaaa ttttttcccc caaggggaaa 601 atttcaaaaa aaccccacaa cgggggcgcc ccccaaacag tcattaaggg gccccctttc 661 ccccaaaagg ggatttaaat aaatttcccg ggcccttttt ttaa //