LOCUS CO961171 565 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18d07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q19830 Q19830 COSMID F26G1. [1], mRNA sequence. ACCESSION CO961171 VERSION CO961171.1 GI:51334355 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 565) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 574 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..565 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tagatctatc caaagagccc aatctctgtc taacagcgtc cgacggccca attgcctgac 61 aaagtccccc gaggacatag cccccacgaa aaattgaaga tgtgctgcgc gaagctggac 121 aaggcagacg ccgactgcaa gagtcgcttc tgtgactgga acgcgctgag ctcgaacaca 181 gttctcatgt tccttgccac ctgcgcccct agaggcccaa ccgttggcca aatgtgggac 241 tgtgcatcca gccgtgggga ccacacccat tgctgcaaca gaaaaggggt gcaaccgggc 301 tgcatggcct actgcgagac taccaagggg gtgcccacag actacttccg gtacttgttc 361 tgtctgaacg acttcaacaa aatccgggac tgtttcttct accacctcat tgaccagccg 421 aacatcaacg gggacctttg aaattgagag tccaacacaa atttatttct caccacaaat 481 aaatatttaa aagtggaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa aaaaaaaaaa ccaaa //