LOCUS CO961165 555 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18c11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q93456 Q93456 F10G8.7 PROTEIN. [1], mRNA sequence. ACCESSION CO961165 VERSION CO961165.1 GI:51334349 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 555) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 556 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..555 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gatcaaccgt taaagcagca aatattaatt gtctaacttc gacatcgcta aattcgaacc 61 cctttggttc gtcgaaactg aaaataaaca gacgcagaca ggagggaaat cctttgctta 121 aatatattcg caacgtggtt catgaatggg cagacataaa gtgtgatttc gaatgctcta 181 aaaactgtgg cctcctgtat ctctcgctca agtatcataa attacactcg ggttaccttg 241 agacgcggct tcccgatttg aaagattatc aagtcaagat actcctcgca tacgtgagtg 301 ttgaggatcc atcttttctg ctccgtgacc tgaatatggt ctgctaccgt atgaacattt 361 cacttgtgct ctgctactct gtggaagagg cagccgaata tattgagacg ttcaaaagga 421 cagaaaacaa aaacgtggaa accgagttgt caaacattca acaataccgg ttaaagcgac 481 aacaacagtt gcaattgaat aaaacctgaa ctatccatac aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa acaaa //