LOCUS CO961162 483 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18c07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS16_CAEEL Q22054 PROBABLE 40S RIBOSOMAL PROTEIN S16. [1], mRNA sequence. ACCESSION CO961162 VERSION CO961162.1 GI:51334346 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 483) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 582 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..483 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggcttttgaa agaaaggcaa agggctgatc aaggtgaatg gacgtccgct ggagtacctt 61 cagccggaaa tcctgcgcat caagctccag gagccgctgc tcgttgtcgg caaagacaag 121 tatgcaggga ttgacatccg tattcgcgtg aaaggcggtg gacacgttgc ccaaatctac 181 gctatccgac aggccttggc caagtcgctc gttgctttct accaaaagaa tgtggatgag 241 cagagcaaga aagaattgaa ggaacagttc gtcgcctacg atcgcaattt gcttgttgcc 301 gatccgcgtc gtcatgagtc taagaaattc ggcggacccg gcgcccgtgc tcgctaccaa 361 aagtcatacc gttaagtgta tgcagatgat caaaatgcat cgatggctcg aatgttgtca 421 accatttgtt tctgttatgt tggaaaataa acattattac aaaaaaaaaa aaaaaaaaac 481 aaa //