LOCUS CO961160 658 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18c04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO961160 VERSION CO961160.1 GI:51334344 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 658) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 665 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..658 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgtctcgcac tactgccgga ggtattggtt tccaggttgt ggccaagcag gcgagtaaat 61 acagcaacca ggagggagag atgtgcctgg cctggatcaa gaaaatgagc ggcgagaata 121 tcagcaccaa cggcgaccgt gagaacttct acaaattgct aaaagacggc acactactgt 181 gcaagctggc caacgggatt caggcgggct ccgtcaagaa gatccagcag ccgactggca 241 acttcgcctg catggagaac atcaacgctt tcgtgtcgtt cgcgaagagc cagggagtgc 301 ccaccgagga gaccttccag agcgtggact tgttcgaggc acgtgacctc tactccgtgt 361 gcatgaccct gttgtcgttg ggccgaatta tggagaagaa gggaaagccg aacccattct 421 ctggatgaag agtagaattg agtgcagcaa aagacggaca gagcatgtgc tatcgctccc 481 attcgagaac tccccgtttt gcgaattttc tccccgtgtg cgaccttgca acaataccga 541 ggcgttaact gttttcccct ctctctcctc tcaaactgtg ggcatttgaa aatagcgatg 601 ccggaataaa tggccaattc aagaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaacaaa //