LOCUS CO961157 592 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18b12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O88547 O88547 COP9 COMPLEX SUBUNIT 7B. ;contains element MER22 repetitive element, mRNA sequence. ACCESSION CO961157 VERSION CO961157.1 GI:51334341 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 592) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..592 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gctgctgaaa aagacacaaa aatttggtgt cattggcctc taaacacaac atattgcctt 61 acgacctctt aatgggcgca ctcggaatca acaatcaaag agaattcgag gactacatca 121 tccaatccat ttatgacaat gtaattcagg ggagacttaa tccaatgaaa ctccaactcg 181 aactaagtaa ttggagtagt gaggggctta atgaaccgga acttaaattt atggcaacaa 241 ctttgaaaca ctggtacaaa cacagtgatc aattcttgca cacccttgcg aaggaagtcg 301 agcgttccaa aaaatgtgtc gcggaaattg tcgcgaatga aaagaatatt gcggatgaag 361 ttgagaatag acggaaatca gtagctctgg acgaagccaa gaagttcttt ggggacaagg 421 aaggcttcaa accgacgtct aagccggaga caaagcgctt taagagtggt gttcgaatga 481 agcgcggtgg agactgaggc cacggtttcc gaagaagaaa ctaaatcgta aatcgacaag 541 tttgaacaac atgtatttaa tgttttcccg aaaatcaaga tttggattac tt //