LOCUS CO961155 729 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18b08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RT31_YEAST P19955 40S RIBOSOMAL PROTEIN YMR-31, MITOCHONDRIAL PRECURSOR, mRNA sequence. ACCESSION CO961155 VERSION CO961155.1 GI:51334339 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 729) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 870 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..729 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gttgatgcgc aaatgctcaa gatgattcaa acattcatgc tcgacactgc actgttccgt 61 ctgatcggac gcctcttctt cgcaacaatc ggcggcggtt ggccgagtcg aatgcgccga 121 gccggcggcg agaagaagcc accgctgcgc caggcgagtc catcagcacg cgcaattttg 181 cgcacgccgc actcagcaca gtccagttct ccattcagcc ggcgcgcaag ccaatgatca 241 aattcctcgg acggcgccat ccgcagccca agccgttcga cccgaatgcc ggtggcgcat 301 ccagtacagc ggcttcttcc aatgcaacaa gctcgtcaaa gaagagtgaa agcggcgcag 361 aagtggtcga tgtgctggac ttccaagagc tgcccgcaat gttccggcgc gctccaatca 421 gcgaagagga gatccaagtg atcaatagcg gcggattgcg caactgattc agtgacgcca 481 aaagctccgt agagaaccca actctgattg actttgacgc gactagattt gtccaatcca 541 aaggcacaca gacccaaata gagaggcccc cacgacccga ctcattgttt tgcttctccc 601 atagctttag tcaaatcacc ctgtttcaca tttgctccac attcagtgag ctcaattcgc 661 tgctgtccta ttatgtttga tgaatctttt caactttcat tcccgtccat tcttcataat 721 cattatcgt //