LOCUS CO961146 517 bp mRNA linear EST 12-JAN-2011 DEFINITION pe18a07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21955 Q21955 SIMILAR TO NOTCH PROTEIN IN AND JUST UPSTREAM OF THE POLY-GLN REGION, mRNA sequence. ACCESSION CO961146 VERSION CO961146.1 GI:51334330 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 517) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 520 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..517 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctcgtcttgg acacttctgg ccctgacccg accccggttg gccctcccag cgctaaagtc 61 cccagatggg cgaccctccg cacccggcga atggtgctcc cgcttgtccc tggcaggagt 121 tccgggacga cgtggtcagc cgcctagagc tggtgctgtc gcagaaccag cagaacatcc 181 acaagctgcc gctgcccaac gacgcacggg agattgagaa gtcgctgtac ctgaggtacg 241 aggacaagga cgagtacgcg agggccatct ccaaggtgat actggcgatc aagtgcaaca 301 ctgcggagag cgccatcaca gcggacgtgg acctgttcgt gcagaaggtg ggcgccttcc 361 tgcgccagct gcccgccgac agattccagg aggccagggc ccagatggac cagctgatgg 421 ccgcatttgg tgcctccgag aaatgacacg ggcgacccgg ggacggacga ttcgatgttt 481 tctttcaaat aaaaagttaa cgcctcaaaa aaaccaa //