LOCUS CO961142 720 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17h12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains MER22.t1 MER22 repetitive element, mRNA sequence. ACCESSION CO961142 VERSION CO961142.1 GI:51334326 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 720) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..720 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggggcgcat cgacatccat cgactgttcc agttggacag cattcagcag ctgcaggcgc 61 aaaaaagggc gcacaacaag cagaaacagg ccgagaaggg ggccgtggaa gcggagggaa 121 cggacatgga ggtggaccag tgatgagccc caaacgaccc aagtgaccga acagatcctc 181 atttcagtcc aataatgtaa tttgttacac gctttgatcg aggttttttt gactggacca 241 gtaaaggcat tctttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 301 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaccaaaacc ccaaaactat 361 ttccccccca gggggaaatt cggcaaaaac cctccacccg gggggccccc caaccaggct 421 ttaaaggggc ccatttcccc caaaagggat tctaattaaa tttcccgggc ccccttttta 481 aaacttcggg ccgggaaaac cccgggcttt ccccacttta ttccccttgc accacacccc 541 cttttccccc ccggggtaaa aaccaaaaag ccccccccca ttcccccttc ccaaaatttc 601 cccccccgaa agggcaaagg gcccccccct gaaccgcccc tttacccccg ggggggtggg 661 gggttacccc ccccttaccc cctccctttg ccacccccct accccccccc cttttccttt //