LOCUS CO961111 592 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17e01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961111 VERSION CO961111.1 GI:51334295 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 592) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 617 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..592 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tggggccttc agaacgccgc aaaaattggc cgcgtgcgca tcttaccgca cccagatcgg 61 cgcgcccagc gactttcggc acattggcca cgtgggcgcc aacgacaata tttcaacgac 121 agaagatggc aatgctttgg gcgcattgtt gcgttccaaa ggcggtctgg agcacgctat 181 gagagacgtg cctgacgagt tgagggctca tgacgtgcca attcgggaga aggggcgggg 241 ggaggacggc ggacagaggg cacagcagag gcagtgaatg gaagaggagt tcttttcagg 301 tgctgcgtgc gctaattgtt gtttgctgcc tgcacagtgg gtgctttgtc gtcggccgaa 361 ccaaaaccga aatgccctgc caaacggtcc acacctttta ctttattttt gcttcctctg 421 ctaaactaaa aaagctgcgc caatacggga ctcgcgccca aaaccaaaaa tctatttccg 481 ctctgctgtt cacattttat gtacaaattg tgtcattcca cgtttcaaaa tgcgcgaaca 541 tgtcgcgttc tgaataaatt agtctcaaaa aaaaaaaaaa aaaaaaaaaa aa //