LOCUS CO961107 526 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17d09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961107 VERSION CO961107.1 GI:51334291 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 526) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 542 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..526 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcacgagagc gaacttggac gagtcgagcg gcgcccatct cgactgcacg gcgaatggcg 61 ttcatcgcat ggaacagcac ccccgaggag gtggatgcgc ccgccgaagc ggaggaaccg 121 aacaacaatg gaacaatgca aactgggagc agcgctgagg aagaagtgaa gagcgccatt 181 cggccaacgg acggaacaac aacaacagag caagaaggaa acggacgaac aacaaaaaca 241 aagcacagcc gcagagtctt tctcgacgca ttcggcaccc ccagcagagt ctttcacaag 301 ccattcattt tcggtctttc atccccgcaa tccaccattt gttgcccgca ccccaaaagc 361 ccaaaaacag aactacaaac acacacaaac acaattgtcg cggtcagcac tgtgcccgga 421 ggactgtgac caaaacatgc cctaaatgtg cgaatgaata aaacggattc accacaaaaa 481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa accaaa //