LOCUS CO961104 463 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17d06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q94218 Q94218 CODED FOR BY C. ELEGANS CDNA CM10H5. [1], mRNA sequence. ACCESSION CO961104 VERSION CO961104.1 GI:51334288 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 463) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 467 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..463 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tacaaacaaa ataatttcaa gtggcgaaaa agtaacaaaa tggatgtggt tgctgaaaaa 61 ttggaagccc aaaacaacgg agttgcagaa aaggatcaac gtaaaaattc cacaaccgat 121 gtcgatgcag ggctacccga aaatgtcatt tttagtcctc atgaagaaat aaaagttcaa 181 ccaaaacaca agtcagctat tgtgcgtggt cggtatgctt actgtcacta tggacaacag 241 gattttgacg acattggatg gggctgtgcc tatcgatcat ttcaaacagt ttgttcctgg 301 ctcaagtttc aaggccatct tggggacgac aagaaaatcc caacccatgc ccagattcaa 361 cagtgcctcg tagatatcgg cgataaacag ccaaaatttg ttggaagtcg ccaatggatt 421 gggtctcttg aattgagttt ttgcctggaa actatgttcg gca //