LOCUS CO961101 652 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17d01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961101 VERSION CO961101.1 GI:51334285 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 652) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..652 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gacgcattgg tggagtccac tctaagtttc gccggctctc tctcaccgga agctgttggc 61 gcgttcttca cgttcgtgga ccactcgcgc gcgttcagcc actgtgctcc cgcattgagc 121 aagtgcgcgg gtttcctgga ggccaaaggc gactcccttc acgcccattc gctctaccgg 181 cgcgcgctgg aactggtgcc gggacacgag ccagcaacga gttgccacgc caaattgttg 241 cctttcgtgg aggaacacga caccaaggag ctgaacgagg cgctcgacaa gaagaggcga 301 cttcgcgagt tgttgtcaaa gcagctgaaa acggacgagg gagtctcggc acttcgaaag 361 gcattctgca ctcagctctt ccacacctgt cgcatggagg gtaactcgtt gagctctgcg 421 caagtgctcg agacggttac tgcgggagaa cagcagcagg acgaggcgga cgacgagccg 481 ccacacaaga gagcacgtgc ttcatccgca tccacatcgt tgtcgggagc tgccaaatcg 541 ttgattcggg agcagttggc cgaccagtcc cagaaggcgg tgggccaacc ggtggagcag 601 ttagccatga aagcacgtgc ttcatccgca tccgcatcgt tgtccggagc tg //