LOCUS CO961096 566 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17c07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961096 VERSION CO961096.1 GI:51334280 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 566) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 636 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..566 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggctattgat gaccttcagt cagcgaaaat atcgcgccaa tcgccacagc caacagccag 61 tgccccttcc attgcaattg atcgatcacc gctctcggtc ggaatcactg ctctgagact 121 ggatgaagcc tctctgtgtc tccgcactct tcttcttctt cctcctcctc ctcttcgctt 181 caatgctctt ctgcgccaaa gcggatccac agaaggtgtg caggtcggtt gtcggattcg 241 gtggggaaca gggcaaaatg gagcgctgca aacgctgcga gtacaaacgg tgcggcatcg 301 agtgcgagct gcccgaccag aagtgctacg actgcgtgta caacaactgc cgcggatgaa 361 aactaaaggg ccgctggaac agtgcaaatg cggatggctc cctttgctgt tccaaagaat 421 tctttgcatt ccgttctgcg tttgttcaag caaaaatccg atccttttcc gcctcgtttt 481 ctcggacaaa acgcttctct ttctttcgaa atacacatgt cataagtcat aactcataac 541 tcaccaaagt gggccgccat aaagcc //