LOCUS CO961090 755 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17b11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21581 Q21581 COSMID M60. [1], mRNA sequence. ACCESSION CO961090 VERSION CO961090.1 GI:51334274 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 755) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 768 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..755 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gttaacttca ataaaaatgg cgatgaacct caacactggc tacctgagta ccaaccgtgg 61 tattatcaaa atttctgcag agtcatctgc ggtttcatca cttgctccca gctttgagcc 121 aacaggtatg gcggcaaatc ctagcttcta tgacggccga gtcggctacg caagaggact 181 caacttcgtc atcgtcatca tcaacattgt cctctttttc ctgaacttcc tgaatgttgc 241 ggtgtaccgc atggaacgcc tctattcggt ggtgggcgtc atcctgttca tcatcgcgtt 301 cggagtgatg atctggtact tgattgagta tgaagtgaac cgtgggcagt tcattgctgc 361 gacggtcttc atcgggatac agatggtcct gttcatctgg gattaccaaa ttctgcacgg 421 acaggcatac aactgaggag acgaggatgg accccaaact gggaaatgtt tttggatcgt 481 gtaatgtacc gtcgcaacaa ccaacctata tatcccctct ccaattcttc ccatcctacg 541 cttattctca ttatcagcta aacttaagca cctctaacca atcacaccaa acaattttgg 601 ctttttggca tccgactgcc agtctctctc tctctctttg catcgtccaa agtccaattt 661 tccaaaatat ttgtaactgt ccctttcttg ctgacaaatt aaatctgtac tagtaaaaaa 721 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aacca //