LOCUS CO961085 287 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17b03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1] ;contains element MER31 repetitive element, mRNA sequence. ACCESSION CO961085 VERSION CO961085.1 GI:51334269 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 287) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 83. FEATURES Location/Qualifiers source 1..287 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcaccaccaa cggcgaccgt gagaacttct acaaattgct aaaagacggc acactactgt 61 gcaagctggc caacgggatt caggcgggct ccgtcaagaa gatccagcag ccgactggca 121 acttcgcctg catggaggac atcaacgctt tcgtgtcgtt cgcgaagagc cagggaatgc 181 ccaccgagga gaccttccag aacgtggact tgttcgaggc acgtgacctc tactccgtgt 241 gcatgaccct gttgtcgttt gggcgaatta tggagaagaa aggaaag //