LOCUS CO961080 633 bp mRNA linear EST 12-JAN-2011 DEFINITION pe17a06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q99633 Q99633 HPRP18, mRNA sequence. ACCESSION CO961080 VERSION CO961080.1 GI:51334264 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 633) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 508. FEATURES Location/Qualifiers source 1..633 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aagagggccg atttgttcaa gaaggagcga gaggcctatc tggagaagca acggcagttg 61 gagctggaac agcagcagaa tgtgaaggga cagagtgtgg acgatttgct ggacgcgaag 121 ctgtccgccg attccatgga ctcgattccg cgagcggagg tgatccgacg cctccgcgcc 181 agaggtcagc ccatcctgct gttcggcgag accgaagtgc tggcactgag gcggctcaga 241 cgactggaga ttgagagacc ggacctgaac gagggctgga aaaacgactt ccaggcggcc 301 ctgagccaag tggagaagga ggaggtgatg gaacaagtga tcaagggcac ccgagacaga 361 gacgaggcgg gcagacacga cgtccaggtg cagganagcg aagacgacgc aacttgggag 421 caaatcgtga gtcgagctcc aaagctgggc agtggagacg agcagtatga ctggtgactg 481 atcttggcct acatcaacta catcctgaag aagtggggca agggagctaa ctcgcgcgag 541 gagagcgtga ngcgcagcgt gcggggcnaa ctgcaagctg gaatgcatac gcagaccgtg 601 gaccacttgg ctcagttgat cactcgcacg aga //