LOCUS CO961070 423 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16g12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains TAR1.t3 TAR1 repetitive element, mRNA sequence. ACCESSION CO961070 VERSION CO961070.1 GI:51334254 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 423) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 424 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..423 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tccgcttctc gccggacggg cgctggatcg cgtgtgcggt gggacaagag cacaagggtg 61 gccgctggtg gaggctgaag ggcgcggacg gagtgcacaa tcgagtagcg ctgatcccgt 121 tggccgaagt ggagggggac gatgaaaggc ggcagcagaa gtgcccagaa gggggcggag 181 aggagatggg ggcggagagg acaatggtcg gggacgactc aacaacaggg tcgacgacag 241 ctgcgggcag ttgctgaaga ggacacgata gaggggagca aaggaaaaga ctgtgctgcc 301 ggagggactg gagatgcaga tatcttcccg cccgaccaca ttttccactt tgactgttgt 361 gcttcaaatc gattttaaag ggcacttttc aaaaaaaaaa aaaaaaaaaa aaaaaaaaac 421 aaa //