LOCUS CO961069 438 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16g11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961069 VERSION CO961069.1 GI:51334253 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 438) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 461 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..438 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctctcttctg ttcgtctact tcaatttatt ctattggtcc aaatcctcct ggttcccgtc 61 cttttggccc agcctgcgtc cgagagtttt gtaccggccg cggttgccag tgtgggcggt 121 gagtggatgc cactggagaa ggttcgtcgc cgccgtgtga gcgcactcaa ggcggctctc 181 ggaggtgcag tggcggcggg tggcgccgca atcctgtaca aagcgtttaa gggcaagaag 241 aagccctgaa ctgatgatga tgatgatgaa atgaacgaat gaagaagagc gaaatctata 301 tcacacgtgt ccaatcggtt ccaaaaagcg atttttaacc ccttcattta tatatcaatt 361 atcatcgtaa atatccccgt tttccaccgt tgtccactac ccattcaatt gagaaatgca 421 cagcttgggt ggaaaaaa //