LOCUS CO961063 564 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16g05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS12_PIG P46405 40S RIBOSOMAL PROTEIN S12, mRNA sequence. ACCESSION CO961063 VERSION CO961063.1 GI:51334247 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 564) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 607 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..564 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ccgttttcca ccgaggaagg agcaatttca acaacttcac cagatactca taaaacaaaa 61 tggctgagtc tcttgagatg aacgaggcgc tcaaacgcgt tctcaaatca gcgttgattg 121 tggatggcgt tgcacgtgga ctcaacgagg ctgcccgcac tctggacaaa cgtgaggctc 181 acttctgtgt gttcgccaag agctgcgatg aggcctcgta cgagaagctg gtgcgggccc 241 tgtgcaagga gcacaacatc ccggtcatcg aggtggagga caaggcgcag ctgggccaaa 301 tggttggcca atgcaagtac gacaaggacg gagctgctcg caaaatcgtc ggctgctcgg 361 tagccgtggt caaggactat ggccgtgacg aggaggcgaa gaacgaactt caggagtaca 421 tcaggaaggg tgtcaaggca gcggaataag cccgccgaga ccgtctcaag acgtcaagag 481 ctctccacag tttgttgttt caatttatgt actgttgcaa gaattccaat aaattgttat 541 ttgttaaaaa aaaaaaaaaa aaaa //