LOCUS CO961062 410 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16g04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9Y4Z1 Q9Y4Z1 LSM3 PROTEIN, mRNA sequence. ACCESSION CO961062 VERSION CO961062.1 GI:51334246 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 410) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 424 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..410 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agtgcaaatg gccacaacta ctgctgattt aagcgtagcg gtagaggacc tacttgattt 61 gatccggcta agtctcaatg aaagagtgta tgtgaagcta cgacaagatc gtgagctacg 121 tgggcggctg cacgcattcg atcaacattt aaacatgata ttggctgatg ttgaagaaac 181 tgtaaccatt acagagactg atgaggagtc ttttgaggag atttacaaat cgactaaacg 241 acaaatcccg atgctgtttg tgcgcggaga tggcgtcatt ttggtttcgc ctccgaccaa 301 atatattcct tgagtcttac cacgcagagt ctcatttgtt agactattgg tcaataaata 361 tttgcgatca caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaccaaa //