LOCUS CO961060 646 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16g02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961060 VERSION CO961060.1 GI:51334244 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 646) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 685 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..646 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttctccgttc tccggtatgt ccccactcca caaaataact tgtggccgcc ctactggcca 61 cagtgctcga atcaagccct ttgccctttg acggcaggca gtacccgtcc atcgacctga 121 ggctcgtggg ctggccattg gcggacgaag gcgcagaatc gaggggcgac caacaggcga 181 cgcggctgca gtgctacacg gagctggacg cgtcgtttgt ggacgggcag aggctgtacc 241 ggctggagag cggcggccag ccggagggtc ggtcctgcct ggtgcgcgtg gcgaccggca 301 ctcggctgac cctgtcccgg atgggcaccg ccagccctga cagctacgtg cgagtgctgg 361 ccggctcatc gccgctgcac atgcctttgg gaacgcgacg aattcacaag ggccaactgg 421 acttgtacgg ccccgggcag gtgccctgtg agtcggccta cctggtgttc agcacagggg 481 actcttcgcc gcgggagtgg gtcgaattcc ggctggagag ggatacgcat gaggacgcca 541 ggacgacccg gcagagggcg aaggaccttc aggggactga cccataaggg cccattggat 601 acacccacat atgctcactt gtcctacgtt tggacaaaac tgttgc //