LOCUS CO961049 560 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16f01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9TTK5 Q9TTK5 RIBOSOMAL PROTEIN S4Y ;contains element MER20 repetitive element, mRNA sequence. ACCESSION CO961049 VERSION CO961049.1 GI:51334233 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 560) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..560 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 caagcttcgc gagtcgctcc cgctcattct ttttctgcga aaccgtctca agtacgccca 61 gtcctataac gaggcgcgca tgatctgcaa gcaacgtcta attaaagtag acggcaaggt 121 gcgaacggag atgcgtttcc cggctggatt catggatgta atctcgattg agaaaactgg 181 cgagactttc cgtttgttgt acgatgtgaa aggccgcttc acagtccatc gcatccaaaa 241 agtggaggga caatacaaat tgtgcaaggt ggtcaagcaa gcgatcggtc ccaagcaggt 301 gccatacgtt gtgacccatg atgcacgcac cattcgctac ccggacccgc atctaagagt 361 cgatgatacc gtggtgattg atattgtgag cggaaaaatt agcgactacg tgaagttcga 421 ctccggcaat ctctgcatga ttaccggagg ccgcaacatg ggtcgagtgg gcatcatcgg 481 acacagagaa cgccacccgg gatcgtttga cattgtgcac atcaaagact tggccggaac 541 cagttcgcca ctcgtgtgaa //