LOCUS CO961048 466 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16e12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O77095 O77095 HIGH MOBILITY GROUP PROTEIN 1.1. [2] TR:Q9U2A0, mRNA sequence. ACCESSION CO961048 VERSION CO961048.1 GI:51334232 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 466) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..466 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gactcaatcg ctaacaacac aaagttcaag ccccaaaatg ccaaaggcct cctagaagaa 61 caaggacccg aacatgccga agcgggcgca gagtgcctac ttcatctgga tgaacgcgaa 121 ccgcgacaag atcaagaagc caggcatgag cgtcgctgag gtggccaagg ccgctggtgt 181 tgagtggggc aaactgcctg cagctgagaa gtccgtttgg gagaagaagg cggctgacga 241 caagaagcgc tacgagcagg agatggccgc ctaccgacag cagcactgag ctgttcgaag 301 tggatgtgga cctgcagatc cactcgccgc cagaccatca tccaatcccc ttcttcgccc 361 gtatataact cgtgtctcat ctatatatgc atgtgtttgt tttgaccttt tgacaacaaa 421 gaaaaacaca ttcatctttt acaacggata aaatttaaat gaaccc //