LOCUS CO961044 530 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16e07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains TAR1.b1 TAR1 repetitive element, mRNA sequence. ACCESSION CO961044 VERSION CO961044.1 GI:51334228 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 530) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..530 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgctagcttt gaggagttcc agaaagtgaa gcaaaactac ttctacggga aggtgcccgt 61 gctggaggtg gacggcaaac ccttggcgca gagcaccacc attttgctgc tacttgggcg 121 aaaaattcgg tctggccggc aaggacgagt gggagcgcgc caaggccaac gagatcatcg 181 acttccacaa ggacgtggtg gccgagttgg cgccctatat ctacgcaaag atgggctatc 241 gcgagggcaa tgtgccacaa cttcgcaccg acgtgttcgt gcctggacgg gcgcgcttgg 301 cgcccctcta cgagaagctg ctggccgcat ccggctccgg cttcctgttg gccagcggcg 361 tgagcatggt cgacttcctg gtggcggact acgtgctcac tctgcgcaag gaggagccgg 421 aggcgatcgg cgcccaccaa gcgctggtgg agcactccaa gcgtgtgctg gcactcccac 481 agctccagaa atacgtcagc actcgcaaag agtgagactg tgagacactc //