LOCUS CO961043 479 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16e06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961043 VERSION CO961043.1 GI:51334227 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 479) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 755 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..479 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttcccaggct ttgcaggaaa aatatattac aaagacaccg accgcaacgt ctgcctacat 61 gaacacgaaa tggcgatcgc ccaaaatttt tttggaaaca gagaggttga gctttttgcg 121 gaagatagag aaaagacgcc caggacgccc agccgttgtg aattgatctt cgaatcaatt 181 gtttcctttg tgtcctgcat aatcgatgac atttctgctt gccgcggcaa tggtggttgc 241 atccggcttc attcttttct tgggttatac atatcttgaa ccatttatta atgggacgaa 301 gacgggtcct gctgaccaac aacataattc aaacgaaata tgacatcaaa gagttagaca 361 agaagaattg aaaatcgggg caaggcaatc aacaacttgg acaatgacat caaactgatc 421 ttggcacggt tccgctgact cattcgcaat agaacttatc gctcgaatac cagccatga //