LOCUS CO961041 554 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16e03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961041 VERSION CO961041.1 GI:51334225 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 554) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 545. FEATURES Location/Qualifiers source 1..554 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttcatttgcc ccacatcaaa gttctctctc tctctctcag cgcccattta ttagaaagca 61 atacatccga accgagcatg ggcgtgaaca aagagctgct ccaaacacaa gtgcaggcgc 121 taaagctaac caaacaaact ggtggccact actataaaaa gttgttctcc caacactcgg 181 atgtgtgcga ctcgtacggg ggcattgacc cggacgaggt gcccaaatcg gccaggtaca 241 tcatgatggc caacaacgaa ctgcaggcct tcatgcaatt gccgaagaac ttcaacgagg 301 aacgcgactg gcgctcggcc ctgtccaact tcaaggagca ctacagcgac agcgacgtcc 361 cgctcaaact ctttaacaaa acaaaggagc cgttcttggc gttgctgcaa aagcacgcgg 421 ggggaatgag tgctgagcag aaaaagggct gggaggagct gctggacaag gcttacgccg 481 acttgaaaaa gtacggatgg atctgagtgg aactggagac agccgaaaat gaatacaatg 541 atatctcttt cttg //