LOCUS CO961039 605 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16e01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961039 VERSION CO961039.1 GI:51334223 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 605) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 654 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..605 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgtgtcgacc acgctggacg agattgccaa ggacagcgag cacggcctgg gcgcggtgca 61 tgccgccgat gacgcgtacg cggtcgcttc ggaagtgtgc cagagcacgg ctgctgcgct 121 tggcaaacgc atctgggcag tggccgaggg cgcgatggag aagtacgcgc gcgagaagtg 181 cggcgtcgac ctggactcga aacagtgcac cccgttccag ttctgcgaga cgctgctgcc 241 caaaaatttc cccaaaggag attccgaggg ggacgtgtgg agtatggatt gcttctgctc 301 gatgacaatg caatgcagaa ccggcgacta tgacatgatc ggttttgtgc cggtgggtgt 361 cggcacctac gagatctaca tgaagcgagt ggaccaaatg gtcgcgaaac tggacgccat 421 gccggccctc agcgaggcag aactgggcca gcatttggag gcgatcaagg acgcgagaaa 481 gcagccatgg gactggagaa agtaaacgga tgtcccgaga ccacatttga tcagataaat 541 gcaaatcaat ggtatctcta tcgtctgttg agttcgattt tattcgacat aaagaaatgg 601 cgtat //