LOCUS CO961038 661 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961038 VERSION CO961038.1 GI:51334222 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 661) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 662 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..661 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gttgcgcata tcgcatttca tttgccgcac atcaaagttc tctctctctc tctcagcgcg 61 catttgttga aaacgaatag atccgaaccg agcatgggcg tgaacacgga gctgctccaa 121 acacaggtgc aggcgctaaa gctaagcaaa gagactggtg gcgactacta taaagagttg 181 ttcgcccaac actcggatgt gtgcgacgcg tacgggggca ttgacccgga cgcggtgccc 241 aaatcggcca ggtacatcat gatggccaac aacgaactgc aggccttcat gcaattgccg 301 aagaacttca acgaggaacg cgactggcgc tcggccctgt ccaacttcaa ggagcactac 361 agcgacagcg acgtcccgct caaactcttt aacaaaacaa aggagccgtt cttggcgttg 421 ctgcaaaagc acgcgggggg aatgagtgct gagcagaaaa agggctggga ggagctgctg 481 gacaaggctt acgccgacat gaaaaagtac ggatggatct gagtggaact ggagacagcc 541 gaaaatgaat acaatgatat cgctttcttg agtagtggca aagcaattca tcctcggaca 601 gattgatttg ttcaattcct tgacgaataa atttatgcgc ttaaaaaaaa aaaaaaacaa 661 a //