LOCUS CO961035 473 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961035 VERSION CO961035.1 GI:51334219 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 473) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 479 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..473 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttgagtgacc agcaattcat gccggcattt gcttcgctct acaacaccta tttggacatg 61 tcgcagaaaa tcgactggat caaccacaca ttccaggtct gaatcaattc aaatccaaat 121 ttttgcattg atttccctct ccatgtgtac ctgtttgtga tggtcggctc caacatcccc 181 tcgatgattg tcacgctgtt ctgcctctgg gtgctgctga tcaactggtg tccggagtcc 241 tgtggcagct gatcttttcc aacgcgcccg acacttttct gtgcatttat gaactgatcg 301 ggctgtgcgc gttcgctgca caattgcacg gaaatgtgag gggaatggaa tggagtgtcg 361 gtgactcctt tgcggctcac cctataatat cttcgctaga aaaaacctat tgctttggtt 421 atttgagatc gccaaacaat aaacgaaatc aaaatttaaa aaaaaaaaac aaa //