LOCUS CO961032 539 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YO85_CAEEL P34621 HYPOTHETICAL 35.7 KD PROTEIN ZK1236.5 IN CHROMOSOME III. [1], mRNA sequence. ACCESSION CO961032 VERSION CO961032.1 GI:51334216 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 539) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 566 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..539 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtacaaggtg aacctgaacg agaagcactg gaaccggcgc gtctgggaga agggctacgt 61 cggaccgcca ctgcccaaga taaagaggac tggagtgccg ccgattccgg tcactgaggg 121 tgctgtgact ggtgtgcagc gcgcactgat gcgcgagtgg aatgtgatgc agtggctcgc 181 caacccgtat ctcaacgagg aaatggagcg tccatatctg gagcgctacg gcgacatcat 241 tgacgagtgg cgccagcgcg aaattgaggc gaaacagcga aaaatgcctt caaagccgaa 301 gtttacgcaa gtggtgaacg gcgaagtgga gaagcggcgc gccaatgtcg gcaacttgtt 361 gcattcccat cgaaccgtag aggaccaaat gaaggcgttg atccggcgca acagatggga 421 ctgactgctg ttggttgttt agctttttca attgaaattt tcacatttgg cgaggcatat 481 aaaatttaaa atgcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaacaaa //