LOCUS CO961031 695 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MSR1 repetitive element, mRNA sequence. ACCESSION CO961031 VERSION CO961031.1 GI:51334215 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 695) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..695 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tctgccgcgc ccattcccag ccgaccacca catcacatca tccattatgc gcttcctggt 61 gctcgtcccc ctcggcttgt tgctgcttgc cctctgttgt ctgggtgcga aggagggccg 121 ctcggactcg tcggagatgc gcgaggggat gtggggcatg gccggctcgg aggaggtgaa 181 gaagcaggag aaggcgaaca aggagaagca ctcttccgag gagctgggcg gcggacggcc 241 tcgtccccac gcgctgatga gggcggtagt gcgccgtcgc cgttgaaaat ggggagaaag 301 aactgtgtat taattagact ggaggggaac tatcgaaagg gccctagaag agcaacatcg 361 gccctctggt ccagtgtgtt ccctattttc gaataaatat gtattccgcc aaaaaaaaaa 421 aaaaaaaaaa aaaaaaaaaa gaagaagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaag 481 aaaaggaata atataagaaa aaaaaaaaaa agaaaaaaaa ccccaacccc caaaattttt 541 ccccccctgg gggaaatttt cgaaaattcc cctcactggg gggcccccct aaattttctt 601 ttagggggcc ctttcccccc taaagggggc ttattaaaat ctccgggggc ccctttttta 661 accccccggg ggggggaaaa cccccggggt ttccc //