LOCUS CO961030 605 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to WP:CE25630 Y94H6A.C ;contains OFR.t2 MSR1 repetitive element, mRNA sequence. ACCESSION CO961030 VERSION CO961030.1 GI:51334214 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 605) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..605 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tggacaggtg gtccgggtgg cgaacatgat caagcggatt gggggcttac gggcggcact 61 caagcagcgc tacttgaccg atgacaaccg ggcaggcgaa tttgtcgggg aagaccagtt 121 cgggaatcgc tacttccagg agaacaccta cttcatgccg agaaaccgct acgtgatcta 181 ctccgagagg gtttggctcg actacgacgc gtcccaaatt ccggcggagt ggcacggctg 241 gctgcaccac atttgcgacg acccgcccac ggtgaagccg cccgttcggc acaagtggat 301 gatgcagcac cgggagaaca actccctggt tctgggggag aagtacgtgc cctactcgac 361 cacacgaccg aaaatccagg gatgggtgcc gggtcaggga aaggcatccg aagtgtgagc 421 tggcaagaaa acaatataga ggagcatggc caattcggcg tgtacttcgt agatgaatgt 481 aaaaataaaa tgctttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ccaaaacccc gaaactattt ccctcccagg 601 ggcaa //