LOCUS CO961027 506 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16d01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961027 VERSION CO961027.1 GI:51334211 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 506) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 521 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..506 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggcgtttac agcggccatt caagatgaga aatatttcac atgcaatgtg ggaggcttca 61 aagcaaccaa tttgagcgtg gagctggtca acgatgccat tgtggtgaat ggtgattcca 121 aagggaacga acagtttgaa cgtcgagtgg tggtgccgag tggcattgag aagggctcca 181 tcacctacga gttggacatc cgaaagggac agctgcgcat tgtggcccaa caactgggtg 241 cctcttctgg cggaggagcg cagccaagac tcctcctgga cagagaaatc actgtgatgg 301 cggacccaga cccggctgag gataacggag agccggtcga ggcgtcagtg gatgaagagt 361 gagaagtgag aacttccgtt aggtgatttt acctggacac gaatttattg aagaatgcgc 421 aagaagaatt agtcaacgca ttggaatttg ggaagcacat ttcgttaaaa tctaatttag 481 aaaaaaaaaa aaaaaaaaaa aaaaaa //