LOCUS CO961026 375 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16c12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961026 VERSION CO961026.1 GI:51334210 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 375) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 381 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..375 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gactattaag cgtaaaactc ccgttaatca cccttacaat gacaaaagaa agcgtctaca 61 atccggggat agtggagcgg acctttgacg ccgtgctgga caagtgcgtt agcgtccagg 121 cagtggtcca tcaaacggtt gtgaccacaa aggccagtct gaagcggacc ttcggcatca 181 gcttcgcaaa atgagcagca gcagcaaccg cccaaatagt actaggttat tattattgat 241 caaaccatcg aaacagggga aagctgttga tgtctggtat atttgcctat ttgtaaatgg 301 ataaaaatgc tctcttggac tggcttaaaa aataaaaatt ttgaatacct aaaaaaaaac 361 aaaaactcga gacta //