LOCUS CO961019 456 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16c03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961019 VERSION CO961019.1 GI:51334203 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 456) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 514 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..456 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 catcgcatgg aacagcaccc ccgaggaggt ggatgcgccc gccgaagcgg aggaaccgaa 61 caacaatgga acaatgcaaa ctgggagcag cgctgaggaa gaagtgaaga gcgccattcg 121 gccaacagac ggaacaacaa caacagagca agaaggaaac ggacgaacaa caaaaacaaa 181 gcacagccgc agagtctttc tcgacgcatt cggcaccccc agcagagtct ttcacaagcc 241 attcattttc ggtctttcat ccccgcaatc caccatttgt tgcccgcacc ccaaaagccc 301 aaaaacagaa ctacaaacac acacaaacac aattgtcgcg gtcagcactg tgcccggagg 361 actgtgacca aaacatgccc taaatgtgcg aatgaataaa acggattcac cacaaaaaaa 421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aacaaa //