LOCUS CO961017 748 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16c01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q65358 Q65358 HYPOTHETICAL PROTEIN ;contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO961017 VERSION CO961017.1 GI:51334201 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 748) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Possible reversed clone: similarity on wrong strand Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..748 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggcgttgcgc attcatcctg ctcttggtcg tcatcggtgt gcttgccatg ctggagctca 61 ccactgccga tccaatcact cacttcaatg agcgcgtggt cgggctgctg gtggagcacg 121 aggcggacga gccgatgatt gagcgcatga ggcgctgggg cggcggcggc atcggagcgg 181 agcgaatgcg acgccaaatg ggcggtggag ccggtggtgg tggcggaggc ggcagaaact 241 gttgcgactg ctgcactggc tcttgcggat gcgagatttg ctgtgtaccg aactggggcc 301 gcaaatgaag gaacggagat tgggaacaat aaacagtcga tcaatagaca aattgatatg 361 ccatttatgc ggtgaatgga ctgaaattgc gtacaaattt gaattccaaa aaaaaaaaaa 421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa accgggaccc ctgaattttt ttccccccag 541 ggggaaattt cgcaaaattc cctccaaggg ggggcccccc gaccttggtt ttagggggcc 601 cctttccccc taaagggggt ttatttaaat ttccgggggc gtttttttac aactccgggg 661 gggggaaacc cctgggtttc cccccttttt ccccctgggc ccaatccccc ctttcccccc 721 cgggggaaaa aacaaaaagg cccccccc //