LOCUS CO961014 504 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16b09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO961014 VERSION CO961014.1 GI:51334198 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 504) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 597 Seq primer: SL1 primer High quality sequence stop: 501. FEATURES Location/Qualifiers source 1..504 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cctaaatcgc tgtgcattta cgaccgtgct gaagcaacca ttttccactt caacaccagc 61 gttcaatcca ttccgttttg gctttaaaaa atggaatatt ttcgcaccca aacgcttaaa 121 ctggatgcca cagaacactc tggaacggaa attgttcgaa gaacagaaga aaaatgaatt 181 tttgacactg caacttttgc tcgaaaaatc gagtatgaaa attctcagca ctgatatggg 241 catccaaatg caatacgccg ctgcccaaag tgccgttcag acaattggct atgagtcgtg 301 cagtggcatg gcagcaaatg ttgtgaagaa ttttgcgaag caactggatc tggaccgcaa 361 ccaatggaac tgttttgtct ttgatactga ttaccgtaca aaatgcgatt ttgtacatac 421 gagcaagttc accgactaca ttttgttctc atacaggcgc ttcaatattg tcctcttcaa 481 agagcactga tttgaatcgt aatg //