LOCUS CO961012 398 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16b06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS16_CAEEL Q22054 PROBABLE 40S RIBOSOMAL PROTEIN S16. [1], mRNA sequence. ACCESSION CO961012 VERSION CO961012.1 GI:51334196 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 398) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 544 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..398 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ccgctgggat accttcagcc ggaaatcctg cgcatcaagc tccaggagcc gctgctcgtt 61 gtcggcaaag acaagtatgc agggattgac atccgtattc gcgtgaaagg cggtggacac 121 gttgcccaaa tctacgctat ccgacaggcc ttggccaagt cgctcgttgc tttctaccaa 181 aagaatgtgg atgaccagag caagaaagaa ttgaaggaac agttcgtcgc ctacgatcgc 241 aatttgcttg ttgccgatcc gcgtcgtcat gagtctaaga aattcggcgg acccggcgcc 301 cgtgctcgct accaaaagtc ataccgttaa gtgtatgcag atgatcaaaa tgcatcgatg 361 gctcgaatgt tgtcaaccat ttgtttctgt tatgttgg //