LOCUS CO961009 544 bp mRNA linear EST 12-JAN-2011 DEFINITION pe16b02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O62289 O62289 JC8.8 PROTEIN. [1], mRNA sequence. ACCESSION CO961009 VERSION CO961009.1 GI:51334193 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 544) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 587 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..544 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gttgtttgcg gtggtgctct tcgccataat caccattgtg ccgtccccgt gcggagcaat 61 gcgccaacag gcggtcgcag tcaagggcca gctgatgtgc gggtcgaggc ccgcctcggg 121 ggtgaaggtg aagctctggg acgaggacga cggcccagac ccggacgacg tgctggacga 181 ggcgttcacc gactccagcg gcgcattcca cctgaagggc tccgagcgcg agctgaccaa 241 cattgacccg gtgctcaaaa tctaccacga ttgcgacgac gggattatgc caggacagcg 301 caagatcaaa ctgcgcattc ctggctctta catcacgggc ggaggcgtcg caaaacgcgt 361 gttcgacgtt ggattgctca atttggagac caaattcccg ggcgaggagc gagatttgct 421 ctgatggaag tgatcagacg aggaaaacac aacatttttc taaatttcaa ttgaatttag 481 attcacaaat tttaaaaatt gctgcattca aatttcaaaa gtgcgcgctc aaacagcaaa 541 aaaa //