LOCUS CO961002 720 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15h10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:3O5B_RAT P31210 3-OXO-5-BETA-STEROID 4-DEHYDROGENASE ;contains element MSR1 repetitive element, mRNA sequence. ACCESSION CO961002 VERSION CO961002.1 GI:51334186 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 720) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..720 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcccatttca gaccattgta caagtggtgc tgcgttttct gacgcagctc ggcctctgcg 61 tggtccccaa gtccagctcg cctgagaggc agcgccaaaa tttggctctg ttcgactttg 121 cgctttcgga cgcggaaatg gcccagatgg aggctctgga cacgcgcgct cggatcatcc 181 acctgaagct gagcgaacac tcgccgctgt tcccctgggg cgagggaaag cccgacttct 241 gagttgtgtg tgactcggaa cgcccaattg acccattccc acataagctg cctccaatcg 301 agttccccat ccttatccgg gctgttcctt gttgatgctc tggctgccct atttttagcg 361 ccgcactaat ccatccactt cgaggtcata tcttatctca acgtacacgt tcatacactt 421 catattgctt ccttgatcgc ccattttgga tgctagacat tagtttacaa tgttttagtg 481 cacattttaa aataaaaata gttgtacctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 601 aaaaaaaaaa aaaaaaaaac caagccccca aaattttttt ttcccggggg gaaattttgg 661 aaaattccct cccccggggg ggccccccaa ccggtctttg gggggcccca ttccccccaa //