LOCUS CO960999 725 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15h07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO960999 VERSION CO960999.1 GI:51334183 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 725) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 660. FEATURES Location/Qualifiers source 1..725 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cactcattct gtttgatttt cgccacacaa aaatgctcta ccggaaaatg atgatcgcgc 61 cctcggctgc cgtcgtgatg atgtcactcc tggtcagcac aggcctctgc tcggctcttc 121 tctggcagca gaacgagccg aaagacaagg ccgctcagcc ggcacaggag gcagcagcag 181 caccgctctt cttcttcccg gcagcaaatg cagcggctct ggagcagttg gccgccgaag 241 aggcgcaact gattgcggag gcggcggcac aacaggcggc ggccgacgag gagcaagaag 301 cggagcttgc cgctctgaag ccgaagcggg cgcagacgtt cgtccgtttc ggcaaacggt 361 cgcagatgga aaatgaaatg gcggctggca tgaagccgaa gagagcgcag acatttgtgc 421 gcttcgggaa gagggcaccg atgatggagg gcgagaagga cgaagccgcg ctgcagaatg 481 aaaaacgggc gcagactttc gtccgattcg gcaaactagc gcagacgttc gtgcgctttg 541 gcaagcgggc tcagaccttc gtgcgcttcg gaaagagagc tgccccgcaa caacaacagg 601 aggcggagaa ctgatttgct ggctgagggc gagtgtggcg gtcgatctct ccttttcaca 661 ncaacaacna cactcccaca catccgtttg tctctctgat ccaccataac caccaccatt 721 cgcat //