LOCUS CO960997 721 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15h05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q95008 Q95008 F25H2.9 PROTEIN. [1], mRNA sequence. ACCESSION CO960997 VERSION CO960997.1 GI:51334181 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 721) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 870 Seq primer: SL1 primer High quality sequence stop: 713. FEATURES Location/Qualifiers source 1..721 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gagtcataca ttttctccgg aaggacgcct atttcaagtt gagtatgcga ttgagacagt 61 aaagttgggt gccacaagca tcggtatcca cacccgggat ggaatcttgt tggctgcaga 121 acgcacatca atgagcaaac tagttgtccc agaatcgatg agcaaaattg ccaatttgga 181 taagcatctt gtctgtgcct cggctgggct gatcgccgat gctcgcactt gggtggaaca 241 cgcgcgagtg gaggcacaaa acttttggtt cacctacggg aagaagattc gcgttgaaga 301 cataacttat aaggtttcca aactggcgct gcactttggc gacgatgact cggagatccg 361 tctcggccgt ccgttcggcg tgtccatgct gtttgccgga atcgaccaca cgggggcgca 421 tctcttccat cttgacccgt ccggcaccta cacaaagtgc ctggcaaagg ccatcggggg 481 cggggcggat ggagccgaac agaccctgca ggagcactgc aaaggcagcg acaagaagat 541 ggatatggac gaggcaaaga aagtcgccct ggacacccta aagcagctga tggaggagaa 601 gatcaacgtc aaaaatgtcg aggttgtcct catcaccccg ggcaccgatg aaaatggcga 661 acagattgga aacatcacat ggatgaccga acaggaactt ggcgaagtga tttcacgcct 721 a //