LOCUS CO960991 679 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15g08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9VT06 Q9VT06 RPS9 PROTEIN, mRNA sequence. ACCESSION CO960991 VERSION CO960991.1 GI:51334175 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 679) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 695 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..679 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcacgtattt tctaaagtct atgacgtgcc tcgtcgtcca ttcgagaaag agcgacttga 61 tcaggagctc aaactcattg gtgagttcgg tctcagaaac aagcgagagg tgtggcgtgt 121 caaactgacg ctggccaaga tccgaaaggc ggcccgtgag ctgctgactc tcgaggacaa 181 ggaccaacga cgtctgttcg aaggcaatgc gctgctccgt cgtctggtcc gagttggcgt 241 gctgcccgag gacaaaatga agctcgacta cgtgcttggt ctccgcgtcg aggacttctt 301 ggagcgtcgt ttgcagacac aggtgttcaa actcggactc gccaagtcca tccaccacgc 361 acgtgtcctc attcgccaaa agcacattcg tgtgcgtcga caggtcgtga acatcccatc 421 gttcattgtg cgtctggact cgcagaagca catcgacttt tcgaccaagt ccccgtacgc 481 aggaggacgc cctggccgcg tcaagcgacg cagcatgaag aagggcaccg gcggcggatc 541 tggaggcgaa gaagaggact aagctccccc agaaagacca atttgagaat gtcgaggtgt 601 tgatttgttg tttggaacac acgtactatt aaagttgttt tgttaaaaaa aaaaaaaaaa 661 aaaaaaaaaa aaaaccaaa //