LOCUS CO960989 647 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15g05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q93576 Q93576 F25H2.5 PROTEIN. [1], mRNA sequence. ACCESSION CO960989 VERSION CO960989.1 GI:51334173 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 647) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 675 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..647 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttttaatagc catttatcga cgcaaatacg cgatgtctac taaaaaccaa gaacgcacat 61 tcatcgcgat caagcctgat ggtgtccaac gcggtcttgt gagcaagata atcaaacaat 121 ttgagcagcg tggttataaa ctggtggcta tcaaaatggt caaagcaacg ccccaacact 181 tggaagtgca ttatgaggat ctgaaggaca aacctttctt cgctggatta gtgaagtaca 241 tggcttcagg gccagttgtg gcaatggttt gggaaggact cgatgttgtg aaacaaggtc 301 gagctatgct cggagccaca aatccactgg tgagtgcagc aggaacaatt cgtggaagct 361 actgtatgga catgggacga aacatctgcc acggatcaga cagtgttcca tcggcagagc 421 gtgaaattgc acactggttc aagcaggaag aattggttga ctgggagcca gcacagatca 481 actggatcta cgagtgagga acaatctgga agacgcccat ctgcgataag gaagaaagtc 541 ccggatacca attcacaaga ccatttgatt tcgaggattt cttattctta ttgtgtcgaa 601 acttaaagtt gacaatgtta aaatttgtgt tgtgaaaaaa aaaaaaa //