LOCUS CO960980 515 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15e10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO960980 VERSION CO960980.1 GI:51334164 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 515) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 516 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..515 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cggacgcttt agggcacgag agcgaacttg gacgagtcga gcggcgccca tctcgactgc 61 attgcgaatg gcgttcatcg catggaacag cacccccgag gaggtggatg cgcccgccga 121 agcggaggaa ccgaacaaca atggaacaat gcaaactggg agcagcgctg aggaagaagt 181 gaagagcgcc attcggccaa cagacggaac aacaacaaca gagcaagaag gaaacggacg 241 aacaacaaaa acaaagcaca gccgcagagt ctttctcgac gcattcggca cccccagcag 301 agtctttcac aagccattca ttttcggtct ttcatccccg caatccacca tttgttgccc 361 gcaccccaaa agcccaaaaa cagaactaca aacacacaca aacacaattg tcgcggtcag 421 cactgtgccc ggaggactgt gaccaaaaca tgccctaaat gtgcgaatga ataaaacgga 481 ttcaccacaa aaaaaaaaaa aaaaaaaaaa acaaa //