LOCUS CO960979 728 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15e09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q22782 Q22782 SIMILAR TO RAS-RELATED PROTEIN. NCBI GI: 1125833. [1], mRNA sequence. ACCESSION CO960979 VERSION CO960979.1 GI:51334163 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 728) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 802 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..728 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcttctgatt ttggatatcc cttgaagaat ttaaattggt atctcctttt tagcaaagcg 61 ttggcaagac ttcactcgtt acagggttca tgtacgacag ttttgacaat acatatcacg 121 cgaccattgg gattgatttt ctcaccgaga cgatgtatct tgcggacaga acggttacac 181 ctcagctttg ggacaccgcc ggacaggaac ggttccattc actcattcca tcctatattc 241 gcgattctac cgttgccgtg gtcgtttacg acatcacaaa tgcaaattcc ttccaccaaa 301 cttcgaaatg gattgatgat gtgcgcaccg aacggggcag cgatgtaatt ataatgctcg 361 ttggcaataa aacagatctg gctgacaaga gacaagtttc tacagaagag ggtgagcaga 421 aggcaaagga gctgaatgtc atgttcattg agacatcggc caaagcaggc tacaacgtga 481 aacagttgtt ccgaaggatt gccagtgctc ttcctggaat tgaagtggag aagtcatctg 541 atgcgaagca agttgtggac attgggccaa tcaagccacg ccagattgtg accgaagaag 601 gatcgtgctg gtgttaagcg ccgggatgcg gcaaaacaca atccttttaa atgtggacct 661 ttttgaaatt gatttttacg attaattttg attattaata ttatttatgg acatatgtat 721 ttgtttgt //