LOCUS CO960976 813 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15e03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q17166 Q17166 CUTICULAR COLLAGEN BMCOL-2, mRNA sequence. ACCESSION CO960976 VERSION CO960976.1 GI:51334160 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 813) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 492. FEATURES Location/Qualifiers source 1..813 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atggaccagc cgagcagcaa ggaggacgcg cggcgcgagg ccgaggcatt gcgcacactg 61 gccttcttcg gggtgtgcct gtgcacggcg gccatgctcg tcactgtggt gtccgtgcca 121 ctgtgctacc aatacgtgca acgccaggcc tcccagatgc agtcggagtt ggacttctgc 181 aggagcaggg cgggcagcat ctggggcgag gtgacgcgca cccagggcat ggcctcggtg 241 cagggcaaag tacgccacgc gcgccattcc ggcttcctga ctgcctggtc ctcgccgatg 301 cgcagcggcg agctgaggag gtccgcgccg aggcgccaac gtgacggcta tgggggcgcc 361 tcggcgggtg tctccagcgc tcctgcgtcg gcgggcggct gctgcggctg tggagtgtcg 421 cagccgggcc cacccggtcc catgggaccg ccggggccct ccggacagga cggacactca 481 ggaatggcgg gacgccgggg agaggacgct cggccacgtg cacagccggc cgcctacttt 541 gtggagccgt gccaacattg cgagaaggcc gaggaccgac ctcctgagtt gcggggaccc 601 ccggggcctc caggaacctc tgggcggcgc ggtcagcctg gccaaccggg gcatcggggt 661 ggccgtcgcc cacccggacc ggcgggtccc tcgggccgac ccgggacact acgataactc 721 ggcctacctg gaaagccggg aaaacttaag gagggccccc cgtgcaaggc cccccggacc 781 gccgggccac gagggccacc ttgtgcgccg ggc //